Pharmacological inhibition of autophagic flux sensitizes three-dimensional cell culture to treatment-induced cell death. (a) Cells were treated with chloroquine (25 μM) and vincristine (10 ng/ml) for the last 48 h, where indicated. (b) Cells were treated with bufexamac (30 μM) and vincristine (10...
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Pharmacological inhibition of autophagic flux sensitizes three-dimensional cell culture to treatment-induced cell death. (a) Cells were treated with chloroquine (25 μM) and vincristine (10 ng/ml) for the last 48 h, where indicated. (b) Cells were treated with bufexamac (30 μM) and vincristine (10 ng/ml) for the last 48 h, where indicated. (a and b) BE(2)-C cells grown under 3D-static conditions for 4 days. Caspase-3 (DEVDase) activity was measured using a fluorometric assay with activity (slope/min) measured relative to untreated cells. Bars represent mean values of at least three independent experiments, error bars represent S.E.M. Significant differences between groups were tested using an unpaired, two-tailed t-test. **P<0.01; ***P<0.001. (c,d) Western blot analysis of PARP cleavage in 3D-grown cells. Cells were cultured for a total of four days, with treatment starting 72 h (CQ, BUF) or 48 h (VINC) before lysate preparation. β-Actin served as a loading control. Numbers indicate the ratio of cleaved to full-length PARP. cl., cleaved; f.l., full-length. (c) BE(2)-C cells treated with vincristine (VINC, 10 ng/ml), chloroquine (CQ, 25 μM) and bufexamac (BUF, 30 μM) where indicated. (d) IMR-32 cells treated with vincristine (VINC, 3 ng/ml), chloroquine (CQ, 25 μM) and bufexamac (BUF, 30 μM) where indicated. (e-f) Three-dimensionally grown (3D) BE(2)-C cells were treated with chloroquine (CQ, 25 μM, 72 h) or bufexamac (BUF, 30 μM, 72 h) and vincristine (VINC, 48 h) (e) or doxorubicin (DOXO, 48 h) (f) in various concentrations. IC50 values were calculated with GraphPad Prism (function: log(inhibitor) versus normalized response; variable slope). Number of viable cells was assessed by automated cell counting and trypan blue exclusion and normalized to untreated cells. (g,h) One day after seeding, chips containing 3D-cultured BE(2)-C (g) or IMR-32 (h) cells were transferred into the bioreactor system (3D-BR) and medium or medium containing compounds was pumped through the system for 48 h. Where indicated, vincristine (VINC, 10 ng/ml, 48 h) or bufexamac (BUF, 30 μM, 48 h) was applied. Results are displayed as means of at least three independent experiments. Error bars represent S.E.M. Significant differences between groups were tested using an unpaired, two-tailed t-test. *P<0.05; **P<0.01. (i) BE(2)-C cells were grown as 2D or 3D culture and treated with doxorubicin (0.5 μg/ml) for 48 h. (j) BE(2)-C cells were grown as 3D culture, treated with doxorubicin (0.5 μg/ml) for 48 h and co-treated with chloroquine (CQ, 5 μM) or bufexamac (BUF, 30 μM) where indicated. (i,j) Mean fluorescence was detected by flow cytometry. Bars represent mean values, error bars represent S.E.M. Significant differences between groups were tested using a paired, two-tailed t-test. **P<0.01; *P<0.05
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